CDS

Accession Number TCMCG073C06837
gbkey CDS
Protein Id XP_010530229.1
Location join(3218511..3218841,3219416..3219651,3219782..3219928,3220057..3220218,3220289..3220372,3220560..3220630,3220713..3221070,3221179..3221334,3221416..3221513,3221592..3221640,3221711..3221863,3221948..3222091,3222165..3222258,3222464..3222625,3222702..3222747,3222833..3222927,3223022..3223106,3223328..3223412)
Gene LOC104806843
GeneID 104806843
Organism Tarenaya hassleriana

Protein

Length 851aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010531927.1
Definition PREDICTED: putative transcription elongation factor SPT5 homolog 1 isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription elongation factor Spt5
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15172        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006354        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006368        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032044        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCGGCGCAGAGGCGATGACGACGATGATGATCTTGACGAGGAGTACGGTGAAGAGGATGCTGCGGCAGAGTTTGACGATGAAGAGGAGGAGGAGATAGTTGGCCGTGGCGGGAGTTCGAGTCGGAAGAGGGGAAGATCGGATTTTATTGATGATTATGCGGAGGAGGATTCCGAAGAGGAGGAGGAGGATGAGGAAGACGATGATTATGGAGGTCGTGGAGCAAGGGGAAATAAGAAGAAGAAGAAGTCTTCGGCTTCCATATTTTTGGATGAGGAAGCTCAGGTGGATGAGGAGGATGAAGAGGAAGAAGAAGAAGGAGAGGACGATTTCATAGTGGATGGTGGAGCCGACATACCTGATGAGGGTGTTGGTAGACGACTTCATGAACGTAGGTTTCTTTCTCGTGAGGAAAACGAAGAGGATGTTGAAGACCTTGAAAGGAGAATTCAGGAGAGGTATTCTAGGCATCATGCGGAATATGATGAGGAGGCCACAGATGTTGAGCAGCAAGCACTTTTGCCATCAGTCCGGGATCCAAAATTGTGGATGGTGAAATGTGTGATTGGCCGTGAAAGGGAGGTTGCTGTTTGTCTAATGCAAAAATTCATTGATAGAGGATCAGATTTGCAGATCAGGTCTGTTATTGCACTTGATCATCTGAAAAACTATATATATGTTGAAGCAGATAAGGAAGCTCACGTGAAAGAGGCCATCAAGGGAATGCGGAATATTTTTCATAGTCAGAAGATTTTACTTGTTCCTATAAGAGAAATGGCAGATGTTCTGTCCGTTGAAAGCAAAGCAATTGATTTATCTCGGGATACCTGGGTTAGAATGAAGATTGGAACATATAAAGGGGATCTTGCTAAGGTTGTTGATGTAGATAATGTGCGTCAGAGGGTCACAGTCAAGTTGATCCCGAGGGTTGATATGCAGGCACTAGCTAATAAGTTGGAAGGGAGAGAAGTTGTAAAGAAAAAAGCCTTTGTTCCTCCTCCGCGCTTCATGAATATTGATGAGGCGAGGGAATTGCACATTCCTGTTGAGCGCCGGAGAGATCCAATTACTGGTGAATACTTCGAAAATATTGGTGGCATGCAATTCAAAGATGGTTTCTTGTACAAAACTGTCTCGATGAAGTCAATTACTGCTCAGAATATTACACCAAGTTTTGATGAGCTTGAAAAATTCAATAAACCAAGTGAAAATGGGGAGAGCAACATTGCTAGTCTGTCAACTTTATTTGCAAACAGAAAGAAAGGGCATTTCATGAAGGGGGATGCAGTTATTGTCATCAGGGGTGATCTAAAAAATTTGAAGGGATGGGTCGAGAAAGTGGATGAAGAGAATGTTCATATCAAGCCAGAAATGAAAGGCCTCCCTAAAACTGTTGCTTTAAACGAGAGAGACCTTTGCAAATACTTCGAACCTGGAAATCATGTGAAGGTTGTTTCTGGAACCCATGAAGGAACAACCGGCATGGTTATCAAAGTTGACCAGCACGTTCTTATCATTCTGTCTGATACAACTAAAGAAGATATACGTGTATTTGCTGATCATGTCGTTGAGAGCTCAGAAGTGACAACAGGTGCTACCAAAATTGGAGACTATGAACTCCATGACCTTGTCCTTCTGGATAACCTGAGCTTTGGAATAATCATACGACTGGAAAATGAAGCTTTTCAGGTTCTTAAAGGGGTCCCAGACAGACCAGAGGTTGCTCTTGTCAAACTCAGAGAAATCAAGTGCAAAATTGAGAAGAAATCTGATGCGCAAGACCGCTACAAAAATACCATCTCTGTGAAAGATGTTGTCAGAGTCATTGAGGGTCCTAGCAAAGGAAAGCAAGGTCCAGTGATGCATATTTATAAAGGGGTCTTATTTATAAATGACCGACATCACCTTGAGCATGCTGGATTTATCTGCGCTAAGTGTACATCATGTGTTGTTGTTGGTGCACCACGCCCTGGTGCTGATAGAAATGGTGATTCCTTCTCAAGGTTTGGCACTTTCAAGACACCAGCCCCAGTACCCCAATCTCCAAGGAGATTTCAACGTGGAGGCATGGGATATAACTCTGGAGGGAGACATAGGGGAGGAAGAGGGGGTCATGATGCCCTGGTGGGTACTACAGTCAAAATTCGCCTGGGTCCTCACAAGGGATATAGGGGACGTGTAGTGGAAGTCAAAGGTCCATCGGTACGTGTGGAACTTGAATCTCAGATGAGGATTGTGACAGTTGACCGGAATGCAATTTCAGATAATGTGGTTGTGACACCAACAAGAGACACATCTCGGTATGGTATGGGAAGCGAAACACCTATGCATCCTTCTCGCACTCCACTTCATCCATATATGACTCCAATGAGGGATCCTGGAGTAACAGCTACACCTATCCATGATGGGATGAGAACCCCCATGCGTGATAGAGCTTGGAACCCTTACACGCCTATGAGTCCACCTAGGGATAACTGGGAAGATGGGAATCCGGGTTCTTGGGGAACAAGCCCACAGTATCAGGTAAGATTTCATCCATGGGCCTACCGGTGA
Protein:  
MARRRGDDDDDDLDEEYGEEDAAAEFDDEEEEEIVGRGGSSSRKRGRSDFIDDYAEEDSEEEEEDEEDDDYGGRGARGNKKKKKSSASIFLDEEAQVDEEDEEEEEEGEDDFIVDGGADIPDEGVGRRLHERRFLSREENEEDVEDLERRIQERYSRHHAEYDEEATDVEQQALLPSVRDPKLWMVKCVIGREREVAVCLMQKFIDRGSDLQIRSVIALDHLKNYIYVEADKEAHVKEAIKGMRNIFHSQKILLVPIREMADVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRVDMQALANKLEGREVVKKKAFVPPPRFMNIDEARELHIPVERRRDPITGEYFENIGGMQFKDGFLYKTVSMKSITAQNITPSFDELEKFNKPSENGESNIASLSTLFANRKKGHFMKGDAVIVIRGDLKNLKGWVEKVDEENVHIKPEMKGLPKTVALNERDLCKYFEPGNHVKVVSGTHEGTTGMVIKVDQHVLIILSDTTKEDIRVFADHVVESSEVTTGATKIGDYELHDLVLLDNLSFGIIIRLENEAFQVLKGVPDRPEVALVKLREIKCKIEKKSDAQDRYKNTISVKDVVRVIEGPSKGKQGPVMHIYKGVLFINDRHHLEHAGFICAKCTSCVVVGAPRPGADRNGDSFSRFGTFKTPAPVPQSPRRFQRGGMGYNSGGRHRGGRGGHDALVGTTVKIRLGPHKGYRGRVVEVKGPSVRVELESQMRIVTVDRNAISDNVVVTPTRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGVTATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQVRFHPWAYR